Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF3465

Experiment: Ying_all64 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep C; time point 3
345,379	+				-0.1
345,386	+				+1.1
345,386	+				-0.7
345,386	+				-1.0
345,387	-				-0.2
345,387	-				+0.6
345,459	-				+0.7
345,495	+				-1.1
345,496	-				+0.7
345,496	-				+0.2
345,500	-				-0.7
345,668	+				+3.7
345,668	+				-0.4
345,669	-				+0.3
345,722	+				-0.3
345,722	+				-0.9
345,722	+				-0.6
345,723	-				-1.7
345,727	-				+0.1
345,775	+				+0.2
345,973	-				+0.3
345,973	-				+0.3
346,046	+				-0.7
346,237	-				+0.3
346,237	-				-0.2
346,251	-				+0.4
346,273	+				+0.4
346,274	-				+0.6
346,294	+				-0.1
346,294	+				+0.0
346,294	+				+0.8
346,294	+				+0.0
346,294	+				+0.9
346,336	+				+0.7
346,365	+		GFF3465	0.14	-1.1
346,366	-		GFF3465	0.14	-1.0
346,502	+				+0.5
346,527	-				-0.8
346,691	+		GFF3466	0.20	+0.2
346,844	-		GFF3466	0.42	-0.3
346,844	-		GFF3466	0.42	+1.3
347,419	+				-0.6