Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF3398

Experiment: Ying_all64 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep C; time point 3
281,598	+		GFF3397	0.27	+0.2
281,599	-		GFF3397	0.27	+2.9
281,656	-		GFF3397	0.32	-0.8
281,656	-		GFF3397	0.32	+0.9
281,874	+		GFF3397	0.50	-0.1
281,874	+		GFF3397	0.50	+0.8
281,874	+		GFF3397	0.50	+0.1
281,874	+		GFF3397	0.50	-0.1
281,874	+		GFF3397	0.50	+0.2
281,875	-		GFF3397	0.50	-1.0
281,875	-		GFF3397	0.50	-0.4
281,875	-		GFF3397	0.50	-0.7
282,250	-		GFF3397	0.80	+1.0
282,511	-				+1.3
282,723	-		GFF3398	0.15	+0.4
282,926	+		GFF3398	0.32	-0.1
283,190	+		GFF3398	0.53	-0.3
284,161	-		GFF3399	0.34	-0.2
284,331	+		GFF3399	0.50	+1.9
284,332	-		GFF3399	0.50	+0.7
284,478	+		GFF3399	0.64	-0.3
284,601	+		GFF3399	0.76	+0.3