Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF3282

Experiment: Ying_all64 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep C; time point 3
165,958	+		GFF3281	0.37	+0.1
165,959	-		GFF3281	0.37	-2.3
165,961	+		GFF3281	0.37	+0.3
165,962	-		GFF3281	0.37	+0.9
166,099	+		GFF3281	0.51	+0.3
166,100	-		GFF3281	0.51	-0.9
166,301	-		GFF3281	0.71	+1.2
167,582	+		GFF3282	0.60	+0.7
168,228	+				-0.6
168,228	+				-2.5
168,228	+				+0.1
168,229	-				-0.1
168,329	-				-1.1
168,685	+		GFF3283	0.21	-0.6
168,844	+		GFF3283	0.28	-0.3