Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF1557

Experiment: Ying_all64 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep C; time point 3
412,041	+		GFF1556	0.45	-0.5
412,814	+				+0.3
412,814	+				+0.0
412,854	+				-2.1
412,854	+				+0.5
413,172	+		GFF1557	0.30	-1.6
413,208	+		GFF1557	0.34	-0.6
413,208	+		GFF1557	0.34	-0.8
413,253	+		GFF1557	0.38	+0.9
413,254	-		GFF1557	0.39	-0.1
413,254	-		GFF1557	0.39	+0.4
413,300	+		GFF1557	0.43	-0.1
413,347	-		GFF1557	0.48	+1.4
413,808	+				+0.5
414,245	-		GFF1558	0.66	+0.8