Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF1073

Experiment: Ying_all64 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep C; time point 3
820,365	+				+0.5
820,566	-				-0.2
820,628	-		GFF1071	0.16	+2.0
820,696	-		GFF1071	0.29	-1.6
820,987	-		GFF1071	0.88	-0.8
821,666	+		GFF1073	0.83	-1.2
821,666	+		GFF1073	0.83	-1.2
821,667	-		GFF1073	0.83	-1.1
821,750	-				+0.3
821,752	+				-0.3
821,752	+				-1.3
821,759	+				+3.3
821,760	-				-0.6
821,772	-				+0.2
821,794	+				-0.1
821,794	+				-0.5
821,795	-				-1.0
821,795	-				-0.9
821,795	-				-0.2
821,795	-				+3.9
821,837	-				+0.8
821,837	-				-1.1
821,852	-				+1.9
821,852	-				+0.2
821,852	-				+2.1
821,852	-				-0.3
821,852	-				-0.8
821,852	-				+2.1
821,852	-				-0.3
821,852	-				+0.5
821,852	-				+0.7
821,852	-				-0.8
821,852	-				+0.3