Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5512

Experiment: Ying_all64 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep B; time point 3
2,511,867	-		GFF5511	0.34	-0.2
2,512,565	+		GFF5511	0.86	+0.3
2,512,565	+		GFF5511	0.86	-0.2
2,512,574	+		GFF5511	0.87	+0.4
2,512,574	+		GFF5511	0.87	+0.4
2,512,574	+		GFF5511	0.87	-0.4
2,512,574	+		GFF5511	0.87	+0.2
2,512,574	+		GFF5511	0.87	-0.7
2,512,575	-		GFF5511	0.87	-0.9
2,512,575	-		GFF5511	0.87	-0.1
2,512,745	+				-0.1
2,512,746	-				-0.2
2,513,002	-		GFF5512	0.11	-0.0
2,513,032	-		GFF5512	0.13	-0.7
2,513,502	+		GFF5512	0.45	-1.1
2,513,502	+		GFF5512	0.45	-0.1
2,513,502	+		GFF5512	0.45	+0.8
2,513,503	-		GFF5512	0.45	+0.2
2,513,503	-		GFF5512	0.45	-1.6
2,513,503	-		GFF5512	0.45	+0.1
2,513,514	+		GFF5512	0.46	-0.3
2,513,515	-		GFF5512	0.46	+0.0
2,513,515	-		GFF5512	0.46	+0.8
2,513,515	-		GFF5512	0.46	-1.5
2,513,763	+		GFF5512	0.63	-0.2
2,513,868	+		GFF5512	0.71	+0.0
2,513,868	+		GFF5512	0.71	-0.5
2,514,309	+				-0.1
2,514,310	-				+1.8
2,514,693	+		GFF5513	0.58	+0.1
2,514,693	+		GFF5513	0.58	+0.4
2,514,693	+		GFF5513	0.58	-0.4
2,514,693	+		GFF5513	0.58	+0.4
2,514,694	-		GFF5513	0.58	+0.2
2,514,694	-		GFF5513	0.58	+0.4
2,514,930	+				+0.5
2,514,930	+				-0.8
2,514,931	-				-0.0
2,514,931	-				+0.3
2,514,931	-				-0.0
2,515,024	+				+0.1
2,515,025	-				+0.0
2,515,068	-				+0.1
2,515,114	+				-0.2
2,515,273	+				-0.9