Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5316

Experiment: Ying_all64 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep B; time point 3
2,323,758	+				+0.3
2,324,009	+		GFF5315	0.55	-0.4
2,324,036	+		GFF5315	0.62	-0.9
2,324,036	+		GFF5315	0.62	-2.0
2,324,460	-		GFF5316	0.65	+2.0
2,325,350	+				-1.0
2,325,398	-				+0.2
2,325,423	+				+0.4
2,325,424	-				-0.2
2,325,424	-				+0.5
2,325,434	+				+0.4
2,325,434	+				-0.8
2,325,435	-				-1.1
2,325,435	-				-0.6
2,325,435	-				-0.2
2,325,435	-				+0.5
2,325,435	-				-0.5