Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4792

Experiment: Ying_all64 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep B; time point 3
1,803,231	+		GFF4791	0.45	+0.1
1,803,360	+		GFF4791	0.58	-0.3
1,803,360	+		GFF4791	0.58	-0.8
1,803,360	+		GFF4791	0.58	-1.0
1,803,360	+		GFF4791	0.58	+0.5
1,803,361	-		GFF4791	0.58	-0.1
1,803,361	-		GFF4791	0.58	+0.1
1,803,690	+				-0.2
1,803,690	+				+0.1
1,803,690	+				-0.3
1,803,690	+				-0.2
1,803,690	+				+0.5
1,803,690	-				-0.1
1,803,691	-				-0.3
1,803,727	-				-1.0
1,803,928	+				-0.2
1,804,281	+		GFF4792	0.38	+0.6
1,804,282	-		GFF4792	0.38	+0.4
1,804,302	+		GFF4792	0.43	-0.1
1,804,302	+		GFF4792	0.43	-0.5
1,804,302	+		GFF4792	0.43	+0.0
1,804,302	+		GFF4792	0.43	-0.8
1,804,303	-		GFF4792	0.43	+0.4
1,804,303	-		GFF4792	0.43	+0.7
1,804,303	-		GFF4792	0.43	+0.0
1,804,303	-		GFF4792	0.43	-0.1
1,804,536	+				+0.3
1,804,536	+				+0.8
1,804,537	-				+0.3
1,804,537	-				-0.2
1,804,911	+		GFF4793	0.26	+0.2
1,804,911	+		GFF4793	0.26	+0.0
1,804,912	-		GFF4793	0.26	-0.1
1,805,076	+		GFF4793	0.44	-0.8
1,805,076	+		GFF4793	0.44	-0.6
1,805,077	-		GFF4793	0.44	-1.0
1,805,077	-		GFF4793	0.44	-0.6
1,805,290	-		GFF4793	0.67	+0.6
1,805,344	-		GFF4793	0.72	+0.1