Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4582

Experiment: Ying_all64 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep B; time point 3
1,523,872	-		GFF4581	0.43	-1.4
1,523,919	+		GFF4581	0.51	+0.2
1,523,919	+		GFF4581	0.51	-1.5
1,523,920	-		GFF4581	0.51	-0.1
1,523,920	-		GFF4581	0.51	+0.6
1,523,978	+		GFF4581	0.61	-0.1
1,523,986	+		GFF4581	0.62	+0.8
1,523,986	+		GFF4581	0.62	+0.4
1,523,986	+		GFF4581	0.62	-0.3
1,523,987	-		GFF4581	0.63	-0.8
1,523,987	-		GFF4581	0.63	+0.3
1,523,987	-		GFF4581	0.63	-0.2
1,524,204	+				-2.0
1,524,205	-				+0.1
1,524,359	+				-0.6
1,524,430	+				+0.4
1,524,432	-				-0.3
1,524,446	+				-0.6
1,524,447	-				-1.0
1,524,497	+				-1.8
1,524,498	-				-0.1
1,524,498	-				-0.3
1,524,559	+				+0.0
1,524,560	-				+1.8
1,524,570	+				-0.4
1,524,570	+				+0.4
1,524,570	+				-0.4
1,524,571	-				-0.4
1,524,571	-				-0.1
1,524,574	+				-0.2
1,524,574	+				+0.8
1,524,574	+				+1.5
1,524,574	+				-0.0
1,524,574	+				-0.8
1,524,574	+				-0.2
1,524,574	+				+0.0
1,524,575	-				+0.3
1,524,575	-				+2.0
1,524,575	-				-0.2
1,524,575	-				-0.7
1,524,575	-				-0.1
1,524,575	-				+0.2
1,524,575	-				+1.0
1,524,575	-				+0.7
1,524,575	-				+0.3
1,524,585	+				-0.0
1,524,641	-				+0.8
1,524,679	+				+0.4
1,524,679	+				-0.8
1,524,679	+				-0.1
1,524,679	+				-0.4
1,524,680	-				-0.2
1,524,680	-				-0.0
1,524,680	-				+0.2
1,524,692	+				-1.4
1,524,693	-				-0.3
1,524,703	+				-0.3
1,524,704	-				-0.3
1,524,710	+				+0.6
1,524,710	+				-0.9
1,524,710	+				-0.9
1,524,711	-				+0.3
1,524,711	-				+0.4
1,524,711	-				+0.1
1,524,804	+				-0.3
1,524,805	-				-0.2
1,524,834	+				-1.3
1,524,834	+				-2.4
1,524,834	+				+0.2
1,524,835	-				+0.2
1,524,862	-				-0.5
1,524,916	+				+0.1
1,524,916	+				-1.2
1,524,917	-				-1.5
1,524,917	-				+0.2
1,524,988	+				+0.7
1,524,988	+				-1.2
1,524,989	-				+0.0
1,524,993	+				-0.5
1,524,994	-				+1.0
1,524,994	-				-1.0
1,524,994	-				+0.6
1,525,094	+		GFF4582	0.13	-1.1
1,525,094	+		GFF4582	0.13	+0.2
1,525,094	+		GFF4582	0.13	+0.3
1,525,095	-		GFF4582	0.13	-1.0
1,525,133	+		GFF4582	0.15	-0.2
1,525,134	-		GFF4582	0.15	-1.2
1,525,188	+		GFF4582	0.17	-0.0
1,525,188	+		GFF4582	0.17	-1.5
1,525,188	+		GFF4582	0.17	-0.0
1,525,189	-		GFF4582	0.17	+0.7
1,525,189	-		GFF4582	0.17	-0.5
1,525,189	-		GFF4582	0.17	-0.1
1,525,227	+		GFF4582	0.19	+0.5
1,525,227	+		GFF4582	0.19	-2.0
1,525,227	+		GFF4582	0.19	+0.4
1,525,227	+		GFF4582	0.19	-1.0
1,525,227	+		GFF4582	0.19	-0.1
1,525,227	+		GFF4582	0.19	+0.3
1,525,228	-		GFF4582	0.19	+0.2
1,525,228	-		GFF4582	0.19	+0.0
1,525,228	-		GFF4582	0.19	+0.2
1,525,301	+		GFF4582	0.22	-1.1
1,525,302	-		GFF4582	0.22	-0.5
1,525,326	+		GFF4582	0.23	+0.3
1,525,326	+		GFF4582	0.23	-1.0
1,525,327	-		GFF4582	0.23	+0.4
1,525,327	-		GFF4582	0.23	-0.5
1,525,327	-		GFF4582	0.23	-0.3
1,525,327	-		GFF4582	0.23	+0.5
1,525,327	-		GFF4582	0.23	-0.1
1,525,386	+		GFF4582	0.25	+0.1
1,525,387	-		GFF4582	0.25	-1.2
1,525,387	-		GFF4582	0.25	-0.3
1,525,387	-		GFF4582	0.25	-1.0
1,525,387	-		GFF4582	0.25	+1.2
1,525,387	-		GFF4582	0.25	+0.4
1,525,476	+		GFF4582	0.29	-2.2
1,525,477	-		GFF4582	0.29	+0.0
1,525,477	-		GFF4582	0.29	-0.7
1,525,772	+		GFF4582	0.41	-1.5
1,525,773	-		GFF4582	0.41	+1.4
1,525,773	-		GFF4582	0.41	-0.4
1,525,902	+		GFF4582	0.46	+0.0
1,526,177	+		GFF4582	0.57	+0.1
1,526,196	+		GFF4582	0.58	+0.4
1,526,196	+		GFF4582	0.58	+0.5
1,526,196	+		GFF4582	0.58	+0.8
1,526,196	+		GFF4582	0.58	+0.2
1,526,196	+		GFF4582	0.58	+0.2
1,526,196	+		GFF4582	0.58	+0.0
1,526,197	-		GFF4582	0.58	-0.0
1,526,197	-		GFF4582	0.58	-1.0
1,526,241	+		GFF4582	0.60	-0.2
1,526,242	-		GFF4582	0.60	+0.6
1,526,330	-		GFF4582	0.63	-0.2
1,526,465	-		GFF4582	0.69	-0.5
1,526,526	+		GFF4582	0.71	+0.4
1,526,526	+		GFF4582	0.71	-0.3
1,526,526	+		GFF4582	0.71	-1.2
1,526,526	+		GFF4582	0.71	-0.0
1,526,527	-		GFF4582	0.71	+0.6
1,526,527	-		GFF4582	0.71	-0.0
1,526,527	-		GFF4582	0.71	+0.3
1,526,625	+		GFF4582	0.75	-0.0
1,526,808	+		GFF4582	0.83	-0.2
1,526,808	+		GFF4582	0.83	+0.0
1,526,808	+		GFF4582	0.83	-1.0
1,526,808	+		GFF4582	0.83	-0.4
1,526,808	+		GFF4582	0.83	+0.2
1,526,809	-		GFF4582	0.83	-0.8
1,526,928	+		GFF4582	0.87	+0.2
1,526,928	+		GFF4582	0.87	-0.5
1,526,928	+		GFF4582	0.87	+2.0
1,526,928	+		GFF4582	0.87	+0.3
1,526,928	+		GFF4582	0.87	+0.5
1,527,007	+				-0.2
1,527,117	+				-1.2
1,527,118	-				+0.6
1,527,213	+				-0.4
1,527,214	-				+0.1
1,527,218	+				+0.8
1,527,218	+				-2.8
1,527,218	+				+0.3
1,527,218	+				+0.0
1,527,218	+				-0.1
1,527,218	+				+0.2
1,527,219	-				-0.2
1,527,219	-				-0.2
1,527,219	-				+0.6
1,527,238	-				+0.2
1,527,399	+		GFF4583	0.14	-0.8
1,527,399	+		GFF4583	0.14	+0.4
1,527,418	-		GFF4583	0.16	-0.2
1,527,759	+		GFF4583	0.51	-0.3
1,527,759	+		GFF4583	0.51	-0.4
1,527,759	+		GFF4583	0.51	-0.9
1,527,759	+		GFF4583	0.51	-0.1
1,527,759	+		GFF4583	0.51	-0.9
1,527,759	+		GFF4583	0.51	+0.6
1,527,760	-		GFF4583	0.51	-0.5
1,527,760	-		GFF4583	0.51	-0.2
1,527,760	-		GFF4583	0.51	-0.2
1,527,760	-		GFF4583	0.51	-0.5
1,527,863	+		GFF4583	0.62	+1.0
1,527,864	+		GFF4583	0.62	-0.1
1,527,978	+		GFF4583	0.73	-0.2
1,527,978	+		GFF4583	0.73	+0.5
1,527,979	-		GFF4583	0.73	+0.2
1,528,036	-		GFF4583	0.79	-0.5
1,528,036	-		GFF4583	0.79	-0.2