Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF3398

Experiment: Ying_all64 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep B; time point 3
281,598	+		GFF3397	0.27	+0.8
281,599	-		GFF3397	0.27	+1.4
281,656	-		GFF3397	0.32	-0.4
281,656	-		GFF3397	0.32	+0.8
281,874	+		GFF3397	0.50	+0.2
281,874	+		GFF3397	0.50	+0.6
281,874	+		GFF3397	0.50	+0.8
281,874	+		GFF3397	0.50	+0.6
281,874	+		GFF3397	0.50	-0.3
281,875	-		GFF3397	0.50	-1.1
281,875	-		GFF3397	0.50	-1.5
281,875	-		GFF3397	0.50	+0.5
282,250	-		GFF3397	0.80	-0.8
282,511	-				+1.1
282,723	-		GFF3398	0.15	+0.3
282,926	+		GFF3398	0.32	-1.3
283,190	+		GFF3398	0.53	-0.1
284,161	-		GFF3399	0.34	-0.2
284,331	+		GFF3399	0.50	-0.2
284,332	-		GFF3399	0.50	+0.8
284,478	+		GFF3399	0.64	+0.0
284,601	+		GFF3399	0.76	-0.2