Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF322

Experiment: Ying_all64 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep B; time point 3
343,552	+				+0.2
343,552	+				-1.2
343,553	-				+0.5
343,620	-				-0.4
343,620	-				-0.1
343,620	-				-1.3
343,620	-				+0.1
343,707	-				+0.8
343,754	+				-0.1
343,798	+				-0.4
343,868	-				-0.1
344,156	+				-0.2
344,157	-				+1.8
344,214	-				+0.5
344,577	+		GFF322	0.11	-0.3
344,578	-		GFF322	0.11	-0.7
344,622	+		GFF322	0.26	+0.0
344,940	-				+0.2
345,192	+		GFF323	0.24	-0.4
345,384	-		GFF323	0.40	+0.2
345,557	+		GFF323	0.54	+0.4
345,557	+		GFF323	0.54	+0.0
345,558	-		GFF323	0.54	-0.2