Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF2326

Experiment: Ying_all64 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep B; time point 3
1,210,292	+		GFF2325	0.36	+0.9
1,210,293	-		GFF2325	0.37	+0.6
1,210,422	-		GFF2325	0.50	-0.4
1,210,502	+		GFF2325	0.58	-0.8
1,210,511	+		GFF2325	0.59	-0.2
1,210,511	+		GFF2325	0.59	+1.1
1,210,511	+		GFF2325	0.59	+0.2
1,210,512	-		GFF2325	0.60	-0.8
1,210,512	-		GFF2325	0.60	+1.8
1,210,728	-		GFF2325	0.82	-0.4
1,210,728	-		GFF2325	0.82	+0.5
1,211,191	+		GFF2326	0.29	-0.1
1,211,258	-		GFF2326	0.36	-0.6
1,211,258	-		GFF2326	0.36	+0.2
1,211,278	+		GFF2326	0.38	-0.1
1,211,278	+		GFF2326	0.38	+0.1
1,211,335	+		GFF2326	0.43	+0.1
1,211,393	-		GFF2326	0.49	-0.9
1,211,393	-		GFF2326	0.49	-0.6
1,211,599	+		GFF2326	0.70	-0.4
1,211,600	-		GFF2326	0.70	-0.3
1,211,767	+		GFF2326	0.87	+0.9
1,211,768	-		GFF2326	0.87	-1.9
1,211,907	+				-0.1
1,211,907	+				+0.5
1,211,907	+				+0.4
1,212,230	+		GFF2327	0.29	-0.5
1,212,231	-		GFF2327	0.29	-0.4
1,212,231	-		GFF2327	0.29	-0.2