Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF2170

Experiment: Ying_all64 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep B; time point 3
1,061,305	+				-1.6
1,061,305	+				-0.3
1,061,305	+				-0.8
1,061,306	-				-1.8
1,061,381	+				+0.1
1,061,381	+				-0.3
1,061,382	-				+0.1
1,061,408	+				-0.1
1,061,409	-				+0.3
1,061,582	+		GFF2169	0.28	+0.6
1,061,793	-		GFF2169	0.53	-0.1
1,062,017	+		GFF2169	0.80	-0.3
1,062,485	-		GFF2170	0.14	-0.4
1,062,518	-		GFF2170	0.16	-0.4
1,062,518	-		GFF2170	0.16	+0.4
1,062,518	-		GFF2170	0.16	+1.2
1,062,916	+		GFF2170	0.35	+0.2
1,062,917	-		GFF2170	0.35	+0.2
1,063,075	-		GFF2170	0.42	+2.5
1,063,559	-		GFF2170	0.65	-0.6
1,063,630	-		GFF2170	0.69	+0.2
1,063,642	+		GFF2170	0.69	-0.1
1,063,748	-		GFF2170	0.74	+0.2
1,063,840	+		GFF2170	0.79	+1.0
1,063,841	-		GFF2170	0.79	-0.7
1,064,394	+				-0.4
1,064,395	-				-0.4
1,064,409	+				+0.2
1,064,584	-		GFF2171	0.17	+1.2
1,064,584	-		GFF2171	0.17	+1.0
1,064,997	+		GFF2171	0.41	+0.1
1,064,998	-		GFF2171	0.41	+0.6
1,065,132	+		GFF2171	0.49	+0.4
1,065,132	+		GFF2171	0.49	-0.0
1,065,133	-		GFF2171	0.49	-0.2
1,065,177	+		GFF2171	0.52	-0.0