Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF1580

Experiment: Ying_all64 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep B; time point 3
434,238	+		GFF1579	0.39	+1.1
434,238	+		GFF1579	0.39	+0.5
434,239	-		GFF1579	0.39	-0.5
434,326	-		GFF1579	0.47	-0.0
434,464	-		GFF1579	0.60	-0.1
434,464	-		GFF1579	0.60	-1.1
434,943	-				-2.6
435,462	+		GFF1580	0.56	+0.4
435,920	+				-2.9
435,920	+				+0.1
435,920	+				-0.2
435,920	+				-0.4
435,921	-				-0.1
435,921	-				+0.1
435,975	-				-0.6
436,496	+		GFF1581	0.43	+0.4
436,717	+		GFF1581	0.58	-0.1
436,718	+		GFF1581	0.58	-0.1
436,719	-		GFF1581	0.58	-0.3
436,719	-		GFF1581	0.58	-0.1
436,748	+		GFF1581	0.60	+0.2
436,749	-		GFF1581	0.60	+0.3
436,749	-		GFF1581	0.60	+0.4