Strain Fitness in Acinetobacter baumannii LAC-4 around RR41_RS06370

Experiment: Left Thigh 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Left Thigh 4
1,326,383	+		RR41_RS06365	0.13	-0.6
1,326,476	+		RR41_RS06365	0.23	+0.8
1,326,491	-		RR41_RS06365	0.24	+1.8
1,326,587	+		RR41_RS06365	0.34	-0.4
1,326,588	-		RR41_RS06365	0.34	-0.5
1,326,699	+		RR41_RS06365	0.46	+1.0
1,326,700	-		RR41_RS06365	0.46	-3.0
1,326,756	+		RR41_RS06365	0.52	-0.0
1,326,881	+		RR41_RS06365	0.65	-0.0
1,326,894	+		RR41_RS06365	0.66	-1.6
1,326,949	-		RR41_RS06365	0.72	-1.6
1,327,131	+				-2.4
1,327,311	+				-0.0
1,327,345	+				+1.6
1,327,539	-		RR41_RS06370	0.12	-1.3
1,327,606	+		RR41_RS06370	0.17	+2.0
1,327,650	-		RR41_RS06370	0.20	-0.6
1,327,987	-		RR41_RS06370	0.43	+0.2
1,327,987	-		RR41_RS06370	0.43	-2.0
1,327,988	+		RR41_RS06370	0.43	-1.9
1,328,045	+		RR41_RS06370	0.47	-3.0
1,328,166	+		RR41_RS06370	0.56	-1.4
1,328,167	-		RR41_RS06370	0.56	-3.5
1,328,196	+		RR41_RS06370	0.58	-0.6
1,328,419	-		RR41_RS06370	0.74	-0.6
1,328,494	+		RR41_RS06370	0.79	+0.5
1,328,508	+		RR41_RS06370	0.80	+0.7
1,328,582	-		RR41_RS06370	0.85	-2.3
1,328,828	+				-1.0
1,328,834	+				-1.6
1,328,838	+				-0.0
1,328,869	+				-2.0
1,328,871	+				-0.3
1,328,872	-				+1.3
1,329,105	+		RR41_RS06375	0.49	-2.0
1,329,244	-		RR41_RS06375	0.80	-1.6
1,329,244	-		RR41_RS06375	0.80	-1.6
1,329,377	-				-0.0
1,329,675	-				-3.0
1,329,675	-				-0.0