Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF88

Experiment: Ying_all64 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 3
96,919	+		GFF87	0.56	-0.7
96,919	+		GFF87	0.56	-0.3
96,919	+		GFF87	0.56	+0.4
97,157	-		GFF87	0.76	-1.0
97,157	-		GFF87	0.76	-0.1
97,373	-				+0.2
98,178	+		GFF88	0.52	-0.2
98,178	+		GFF88	0.52	-1.1
98,256	+		GFF88	0.57	-0.7
98,257	-		GFF88	0.57	-0.8
98,257	-		GFF88	0.57	-0.4
98,257	-		GFF88	0.57	+0.6
98,257	-		GFF88	0.57	-0.3
98,574	+		GFF88	0.81	+0.1
99,550	+		GFF90	0.32	-0.3