Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5815

Experiment: Ying_all64 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 3
8,104	+		GFF5814	0.44	+0.8
8,155	+		GFF5814	0.48	-1.4
8,203	+		GFF5814	0.52	+0.1
8,397	+		GFF5814	0.68	+0.1
8,545	+		GFF5814	0.81	+0.1
8,546	-		GFF5814	0.81	-0.2
8,546	-		GFF5814	0.81	-0.0
8,551	+		GFF5814	0.81	-0.8
8,551	+		GFF5814	0.81	-0.2
8,552	-		GFF5814	0.81	+0.3
8,651	-		GFF5814	0.90	-0.4
8,687	-				-0.3
8,835	-				+0.8
8,855	+				+0.4
8,987	-				-0.0
9,087	+				+0.1
9,088	-				+0.4
9,271	+		GFF5815	0.23	-0.1
9,271	+		GFF5815	0.23	+0.0
9,348	-		GFF5815	0.32	-0.2
9,436	+		GFF5815	0.42	-0.2
9,452	-		GFF5815	0.43	-0.2
9,556	+		GFF5815	0.55	-0.3
9,556	+		GFF5815	0.55	-0.1
9,557	-		GFF5815	0.55	-0.1
9,997	+				-1.3
10,719	-				-0.9
10,905	+				+0.6
10,906	-				+0.4
10,906	-				-0.4
10,907	+				+0.1