Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5059

Experiment: Ying_all64 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 3
2,074,916	+				+0.8
2,074,948	-				-0.7
2,074,948	-				-0.9
2,074,958	+				+0.0
2,074,958	+				-1.9
2,074,958	+				-0.2
2,074,959	-				+0.2
2,075,457	+				+0.2
2,075,458	-				+0.7
2,075,881	+		GFF5059	0.19	-0.4
2,075,988	+		GFF5059	0.27	-0.2
2,075,989	-		GFF5059	0.27	+0.2
2,076,110	-		GFF5059	0.36	+0.5
2,076,159	+		GFF5059	0.39	-2.8
2,076,253	-		GFF5059	0.46	+0.2
2,076,478	+		GFF5059	0.63	+0.1
2,076,478	+		GFF5059	0.63	-0.8
2,076,479	-		GFF5059	0.63	-0.1
2,076,479	-		GFF5059	0.63	+0.2
2,076,524	-		GFF5059	0.67	-0.4
2,076,526	-		GFF5059	0.67	-1.0
2,076,563	+		GFF5059	0.70	-2.1
2,076,783	+		GFF5059	0.86	+0.5
2,076,913	-				+0.6
2,077,132	-				+0.4