Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4908

Experiment: Ying_all64 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 3
1,923,529	+				-1.9
1,923,529	+				-1.4
1,923,529	+				-2.4
1,923,529	+				-2.3
1,923,532	+				+0.2
1,923,532	+				-0.5
1,923,532	+				-1.7
1,923,532	+				-0.3
1,923,532	+				-0.9
1,923,532	+				-0.1
1,923,532	+				-0.1
1,923,533	-		GFF4908	0.10	+0.1
1,923,533	-		GFF4908	0.10	+0.1
1,923,533	-		GFF4908	0.10	-0.2
1,923,533	-		GFF4908	0.10	-0.0
1,923,619	+		GFF4908	0.16	-1.0
1,923,619	+		GFF4908	0.16	-0.6
1,923,619	+		GFF4908	0.16	-0.9
1,923,619	+		GFF4908	0.16	-2.1
1,923,619	+		GFF4908	0.16	+0.4
1,923,620	-		GFF4908	0.16	+1.5
1,923,620	-		GFF4908	0.16	-0.5
1,923,620	-		GFF4908	0.16	-0.1
1,923,620	-		GFF4908	0.16	-0.9
1,923,620	-		GFF4908	0.16	-1.7
1,923,620	-		GFF4908	0.16	-1.1
1,923,620	-		GFF4908	0.16	-2.1
1,923,655	+		GFF4908	0.19	+0.5
1,923,656	-		GFF4908	0.19	+1.4
1,923,656	-		GFF4908	0.19	-0.3
1,923,656	-		GFF4908	0.19	+2.5
1,923,829	+		GFF4908	0.32	-0.6
1,923,829	+		GFF4908	0.32	+0.1
1,923,829	+		GFF4908	0.32	+0.5
1,923,830	-		GFF4908	0.32	-0.7
1,923,830	-		GFF4908	0.32	-0.3
1,923,830	-		GFF4908	0.32	-0.5
1,924,423	+		GFF4908	0.75	+0.9
1,924,424	-		GFF4908	0.75	-1.0
1,924,424	-		GFF4908	0.75	-0.1
1,924,564	+		GFF4908	0.86	-0.5
1,924,564	+		GFF4908	0.86	-0.7
1,924,564	+		GFF4908	0.86	-1.4
1,924,564	+		GFF4908	0.86	-0.1
1,924,564	+		GFF4908	0.86	-0.5
1,924,565	-		GFF4908	0.86	+0.4
1,924,702	+				-0.6
1,924,703	-				-0.5
1,924,703	-				+0.3
1,924,703	-				-0.8