Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4815

Experiment: Ying_all64 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 3
1,826,163	-		GFF4814	0.77	+0.6
1,826,163	-		GFF4814	0.77	-0.2
1,826,252	+		GFF4814	0.81	-0.5
1,826,253	-		GFF4814	0.81	+0.9
1,826,339	+		GFF4814	0.85	-0.3
1,826,519	+				-0.1
1,826,519	+				-0.2
1,826,519	+				-0.6
1,826,519	+				+0.9
1,826,519	+				+0.3
1,826,520	-				+0.4
1,826,520	-				-0.7
1,826,520	-				+0.3
1,826,520	-				-0.1
1,826,520	-				-0.2
1,826,520	-				-0.1
1,826,520	-				+0.0
1,826,520	-				-1.1
1,826,520	-				+0.4
1,826,520	-				-0.3
1,826,627	+				-0.7
1,826,628	-				-0.4
1,826,636	+				+0.3
1,826,636	+				+0.4
1,826,778	+				+0.1
1,826,778	+				-1.1
1,826,964	-		GFF4815	0.29	+0.5
1,826,964	-		GFF4815	0.29	+0.2
1,826,964	-		GFF4815	0.29	-0.9
1,827,351	-				-0.2
1,827,384	+				+0.7
1,827,385	-				+0.2
1,827,813	-				+0.1
1,827,813	-				-0.7
1,828,012	-		GFF4817	0.86	-0.7
1,828,012	-		GFF4817	0.86	-0.4
1,828,012	-		GFF4817	0.86	+1.2
1,828,112	+				-0.2
1,828,113	-				+0.3
1,828,113	-				+0.1