Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4325

Experiment: Ying_all64 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 3
1,252,984	+		GFF4324	0.35	+1.3
1,253,020	+		GFF4324	0.38	+0.5
1,253,020	+		GFF4324	0.38	-0.5
1,253,020	+		GFF4324	0.38	+1.5
1,253,021	-		GFF4324	0.38	-0.3
1,253,177	-		GFF4324	0.51	+0.1
1,253,369	-		GFF4324	0.68	+0.9
1,253,369	-		GFF4324	0.68	+0.3
1,253,495	-		GFF4324	0.79	-0.2
1,253,624	-		GFF4324	0.90	-0.1
1,253,635	+				+0.3
1,253,635	+				+0.1
1,253,636	-				+0.1
1,253,636	-				-0.2
1,253,636	-				-0.2
1,253,680	+				-0.6
1,253,681	-				+0.7
1,254,108	+		GFF4325	0.28	+0.3
1,254,109	-		GFF4325	0.28	-0.3
1,254,712	-		GFF4325	0.70	+0.9
1,254,793	-		GFF4325	0.76	+0.1
1,255,017	-				+0.3
1,255,243	+				-0.3
1,255,244	-				+0.3
1,255,244	-				+0.5
1,255,244	-				-1.1
1,255,505	-		GFF4326	0.30	+0.3
1,255,505	-		GFF4326	0.30	-0.4
1,255,505	-		GFF4326	0.30	-1.4
1,255,505	-		GFF4326	0.30	+0.9
1,255,573	+		GFF4326	0.36	+0.2
1,255,963	+		GFF4326	0.69	+0.5