Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4064

Experiment: Ying_all64 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 3
981,383	-		GFF4064	0.17	-0.5
981,451	+		GFF4064	0.32	-0.1
981,514	+		GFF4064	0.46	+0.3
981,514	+		GFF4064	0.46	-0.4
981,515	-		GFF4064	0.46	-0.4
981,682	+		GFF4064	0.83	-1.1
981,772	-				-1.1
981,772	-				+0.4
982,180	-		GFF4065	0.58	-0.3
982,306	+		GFF4065	0.76	+0.9
982,306	+		GFF4065	0.76	+0.3
982,307	-		GFF4065	0.76	+0.3
982,359	+		GFF4065	0.83	-0.3
982,368	+		GFF4065	0.84	+0.3
982,750	+		GFF4066	0.27	-0.7
982,750	+		GFF4066	0.27	+0.4
982,750	+		GFF4066	0.27	-0.1