Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF3724

Experiment: Ying_all64 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 3
616,743	-		GFF3723	0.28	+1.5
616,794	-		GFF3723	0.33	+0.7
616,794	-		GFF3723	0.33	+2.5
616,794	-		GFF3723	0.33	+1.1
616,859	+		GFF3723	0.39	-0.1
616,859	+		GFF3723	0.39	+0.1
617,584	+				+0.7
617,585	-				-0.2
617,848	+		GFF3724	0.25	+0.3
617,848	+		GFF3724	0.25	-1.0
617,848	+		GFF3724	0.25	+0.3
617,849	-		GFF3724	0.25	-2.9
617,849	-		GFF3724	0.25	-0.3
617,914	+		GFF3724	0.29	+0.1
617,915	-		GFF3724	0.29	+0.0
618,109	+		GFF3724	0.41	-0.3
618,592	+		GFF3724	0.71	-0.2
618,592	+		GFF3724	0.71	+0.4
618,593	-		GFF3724	0.71	-0.2
619,094	-				+0.2
619,094	-				+0.2
619,372	+		GFF3725	0.10	+0.5