Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF3062

Experiment: Ying_all64 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 3
140,855	+		GFF3060	0.87	-0.2
140,855	+		GFF3060	0.87	-0.4
140,891	+		GFF3060	0.90	-2.3
140,891	+		GFF3060	0.90	+0.0
140,892	-		GFF3060	0.90	-0.7
141,274	+		GFF3061	0.30	-0.4
141,274	+		GFF3061	0.30	-1.2
141,457	+		GFF3061	0.59	-0.3
141,680	+				-1.4
141,681	-				+0.1
141,776	-				-0.8
142,327	+		GFF3062	0.55	-0.4
142,637	-		GFF3062	0.88	-1.1