Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF2980

Experiment: Ying_all64 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 3
57,981	+		GFF2980	0.15	+0.0
58,008	+		GFF2980	0.21	-0.9
58,041	+		GFF2980	0.27	+1.1
58,042	-		GFF2980	0.27	-0.3
58,042	-		GFF2980	0.27	+0.4
58,042	-		GFF2980	0.27	+0.5
58,042	-		GFF2980	0.27	+0.6
58,042	-		GFF2980	0.27	+0.1
58,044	+		GFF2980	0.28	-0.3
58,044	+		GFF2980	0.28	-0.3
58,045	-		GFF2980	0.28	-1.9
58,045	-		GFF2980	0.28	+0.2
58,069	-		GFF2980	0.33	-0.4
58,173	+		GFF2980	0.53	+0.1
58,206	+		GFF2980	0.59	-0.0
58,206	+		GFF2980	0.59	-0.1
58,207	-		GFF2980	0.59	-0.5
58,440	+				+0.1
58,441	-				-0.0
58,477	-				+0.3
58,613	-				+0.4
58,694	-		GFF2981	0.13	-0.7
58,694	-		GFF2981	0.13	-0.3
58,694	-		GFF2981	0.13	-0.2
59,138	-		GFF2981	0.38	-0.5
59,138	-		GFF2981	0.38	-1.5