Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF2152

Experiment: Ying_all64 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 3
1,042,226	+		GFF2151	0.32	+1.1
1,042,241	+		GFF2151	0.34	-0.8
1,042,379	+		GFF2151	0.48	+1.9
1,042,467	-		GFF2151	0.57	-0.4
1,042,996	+				+0.3
1,042,997	-				-1.5
1,043,227	+		GFF2152	0.32	+0.1
1,043,228	-		GFF2152	0.32	+1.3
1,043,383	-		GFF2152	0.48	-1.4
1,043,434	+		GFF2152	0.53	+0.4
1,043,434	+		GFF2152	0.53	-0.9
1,043,452	+		GFF2152	0.55	+0.6
1,043,453	-		GFF2152	0.55	-0.3
1,043,453	-		GFF2152	0.55	-0.2
1,043,671	+		GFF2152	0.78	-0.3
1,044,312	+		GFF2153	0.29	+0.9
1,044,313	-		GFF2153	0.29	-0.0
1,044,362	+		GFF2153	0.32	+0.5
1,044,362	+		GFF2153	0.32	+0.3
1,044,363	-		GFF2153	0.32	+0.7
1,044,363	-		GFF2153	0.32	-0.8