Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF2145

Experiment: Ying_all64 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 3
1,033,219	-				+0.2
1,033,293	+		GFF2144	0.15	-0.1
1,033,308	+		GFF2144	0.17	+0.1
1,033,404	+		GFF2144	0.28	-1.8
1,033,582	-		GFF2144	0.48	+1.1
1,033,725	+		GFF2144	0.64	-0.3
1,033,726	-		GFF2144	0.64	+0.4
1,033,962	+				-0.5
1,033,962	+				+0.4
1,034,390	+		GFF2145	0.13	-0.3
1,034,391	-		GFF2145	0.14	+0.1
1,034,497	+		GFF2145	0.18	+0.2
1,034,675	+		GFF2145	0.25	-0.5
1,034,676	-		GFF2145	0.25	+0.4
1,035,038	+		GFF2145	0.39	-0.6
1,035,810	-		GFF2145	0.70	-0.2
1,036,280	+		GFF2145	0.88	-0.1
1,036,490	+				-0.2
1,036,777	-		GFF2146	0.44	+0.2
1,036,777	-		GFF2146	0.44	+1.1
1,036,815	+		GFF2146	0.54	+0.1
1,036,816	-		GFF2146	0.54	-0.2
1,036,818	+		GFF2146	0.55	+0.3
1,036,818	+		GFF2146	0.55	+0.5
1,036,818	+		GFF2146	0.55	+0.2
1,036,818	+		GFF2146	0.55	-0.0
1,036,819	-		GFF2146	0.55	-0.3
1,036,819	-		GFF2146	0.55	-0.2
1,036,890	+		GFF2146	0.73	+1.1
1,036,890	+		GFF2146	0.73	+0.1
1,036,891	-		GFF2146	0.73	+0.5
1,037,108	+				-0.5
1,037,109	-				-0.5