Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF2065

Experiment: Ying_all64 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 3
946,542	+		GFF2064	0.54	+0.3
946,543	-		GFF2064	0.54	+0.5
946,578	+		GFF2064	0.57	+0.8
946,578	+		GFF2064	0.57	+1.7
946,579	-		GFF2064	0.57	-2.1
947,166	+				-0.3
947,166	+				+0.1
947,650	-		GFF2065	0.45	+0.4
948,064	-		GFF2065	0.83	-0.2
948,064	-		GFF2065	0.83	-0.1
948,064	-		GFF2065	0.83	+1.9
948,398	+				-0.2
948,399	-				+0.9
948,399	-				-1.9
948,399	-				-0.2
948,647	+		GFF2066	0.11	-1.2
948,699	-		GFF2066	0.13	+0.2
948,747	-		GFF2066	0.14	+0.1
948,830	+		GFF2066	0.17	+2.1
948,830	+		GFF2066	0.17	-1.2
948,831	-		GFF2066	0.17	+0.3