Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF1575

Experiment: Ying_all64 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 3
430,263	-		GFF1574	0.22	+0.0
430,421	+		GFF1574	0.42	-0.6
430,421	+		GFF1574	0.42	+0.1
430,936	+				+1.0
430,937	-				-0.4
430,937	-				-0.5
430,938	+				-2.4
430,938	+				-1.8
430,939	-				-2.7
430,939	-				-4.6
431,159	+		GFF1575	0.18	-4.0
431,252	+		GFF1575	0.33	-2.5
431,312	+		GFF1575	0.42	-3.3
431,508	-		GFF1575	0.72	-4.2
431,780	+				-0.2
431,780	+				+1.5
431,781	-				-1.2
432,261	-		GFF1576	0.61	+0.0
432,261	-		GFF1576	0.61	-0.2
432,416	+		GFF1576	0.78	-1.0
432,416	+		GFF1576	0.78	+0.4