Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF1527

Experiment: Ying_all64 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 3
382,568	+		GFF1526	0.71	+1.0
382,632	-		GFF1526	0.76	-0.1
383,485	+		GFF1527	0.52	-0.1
383,486	-		GFF1527	0.52	+0.0
383,486	-		GFF1527	0.52	-0.9
383,639	-		GFF1527	0.68	-0.4
383,839	+		GFF1527	0.89	-1.0
383,872	+				+0.5
383,873	-				-0.2
384,001	-		GFF1528	0.41	+0.6
384,039	+		GFF1528	0.67	+0.4
384,524	+		GFF1529	0.51	+0.2
384,525	-		GFF1529	0.51	+0.3
384,558	-		GFF1529	0.55	-0.3
384,558	-		GFF1529	0.55	+0.3
384,887	+				-0.0
384,888	-				-0.6
384,888	-				+0.4
384,888	-				+0.2
384,888	-				-0.2
384,888	-				-0.0
384,888	-				-0.2