Experiment: LZ4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_02980 and OHPLBJKB_02981 are separated by 15 nucleotides OHPLBJKB_02981 and OHPLBJKB_02982 are separated by 846 nucleotides
OHPLBJKB_02980: OHPLBJKB_02980 - Cytochrome bd-I ubiquinol oxidase subunit 2, at 3,101,604 to 3,102,743
_02980
OHPLBJKB_02981: OHPLBJKB_02981 - Cytochrome bd-I ubiquinol oxidase subunit 1, at 3,102,759 to 3,104,327
_02981
OHPLBJKB_02982: OHPLBJKB_02982 - Mannosylglycerate hydrolase, at 3,105,174 to 3,107,453
_02982
Position (kb)
3102
3103
3104
3105 Strain fitness (log2 ratio)
-2
-1
0
1 at 3104.504 kb on - strand at 3104.504 kb on - strand at 3104.504 kb on - strand at 3104.504 kb on - strand at 3104.504 kb on - strand at 3104.504 kb on - strand at 3104.504 kb on - strand at 3104.504 kb on - strand at 3104.506 kb on - strand at 3104.508 kb on - strand at 3104.508 kb on - strand at 3104.508 kb on - strand at 3104.508 kb on - strand at 3104.508 kb on - strand at 3104.508 kb on - strand at 3104.508 kb on - strand at 3104.511 kb on - strand at 3104.532 kb on - strand at 3104.584 kb on - strand at 3104.584 kb on - strand at 3104.584 kb on - strand at 3104.587 kb on + strand at 3104.587 kb on + strand at 3104.587 kb on + strand at 3104.588 kb on - strand at 3104.656 kb on + strand at 3104.657 kb on - strand at 3104.657 kb on - strand at 3104.658 kb on + strand at 3104.659 kb on - strand at 3104.666 kb on + strand at 3104.727 kb on + strand at 3104.778 kb on + strand at 3104.778 kb on + strand at 3104.778 kb on + strand at 3104.778 kb on + strand at 3104.846 kb on + strand at 3104.847 kb on - strand at 3104.847 kb on - strand at 3104.867 kb on + strand at 3104.868 kb on - strand at 3104.870 kb on + strand at 3104.871 kb on - strand at 3104.874 kb on - strand at 3104.874 kb on - strand at 3104.881 kb on + strand at 3104.881 kb on + strand at 3104.881 kb on + strand at 3104.882 kb on - strand at 3104.882 kb on - strand at 3104.976 kb on + strand at 3104.977 kb on - strand at 3104.977 kb on - strand at 3104.977 kb on - strand at 3104.978 kb on + strand at 3104.978 kb on + strand at 3104.979 kb on - strand at 3104.979 kb on - strand at 3104.979 kb on - strand at 3104.979 kb on - strand at 3104.979 kb on - strand at 3105.000 kb on - strand at 3105.040 kb on - strand at 3105.040 kb on - strand at 3105.040 kb on - strand at 3105.056 kb on - strand at 3105.088 kb on - strand at 3105.149 kb on + strand at 3105.149 kb on + strand at 3105.150 kb on - strand at 3105.229 kb on - strand at 3105.258 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LZ4 remove 3,104,504 - -1.1 3,104,504 - -1.8 3,104,504 - -0.8 3,104,504 - -0.8 3,104,504 - -0.4 3,104,504 - -0.8 3,104,504 - -0.6 3,104,504 - -1.0 3,104,506 - -0.9 3,104,508 - -0.4 3,104,508 - +1.6 3,104,508 - -0.4 3,104,508 - -0.3 3,104,508 - -0.6 3,104,508 - -0.2 3,104,508 - +0.7 3,104,511 - +0.4 3,104,532 - +0.3 3,104,584 - +0.1 3,104,584 - -0.8 3,104,584 - -1.9 3,104,587 + -0.1 3,104,587 + -1.6 3,104,587 + -0.6 3,104,588 - +0.5 3,104,656 + -0.1 3,104,657 - +0.4 3,104,657 - +1.5 3,104,658 + +0.3 3,104,659 - -0.1 3,104,666 + +1.7 3,104,727 + +1.4 3,104,778 + +0.1 3,104,778 + -0.6 3,104,778 + -1.2 3,104,778 + -0.0 3,104,846 + +1.1 3,104,847 - -0.3 3,104,847 - +0.5 3,104,867 + -0.5 3,104,868 - +0.3 3,104,870 + +0.4 3,104,871 - +0.7 3,104,874 - -0.1 3,104,874 - +0.1 3,104,881 + -0.0 3,104,881 + +0.1 3,104,881 + +0.9 3,104,882 - -0.0 3,104,882 - -1.2 3,104,976 + -0.0 3,104,977 - -2.6 3,104,977 - +0.2 3,104,977 - +0.5 3,104,978 + -0.1 3,104,978 + +0.2 3,104,979 - -0.6 3,104,979 - +0.1 3,104,979 - +0.5 3,104,979 - -0.2 3,104,979 - -0.2 3,105,000 - -0.2 3,105,040 - +0.2 3,105,040 - +0.4 3,105,040 - +1.5 3,105,056 - -0.4 3,105,088 - -0.2 3,105,149 + +0.5 3,105,149 + -0.4 3,105,150 - +0.2 3,105,229 - +0.1 3,105,258 - +0.6
Or see this region's nucleotide sequence