Experiment: Ying_sugar7 rep C; time point 3
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF606 and GFF607 are separated by 446 nucleotides GFF607 and GFF608 are separated by 51 nucleotides
GFF606 - Permease of the drug/metabolite transporter (DMT) superfamily, at 280,442 to 281,353
GFF606
GFF607 - Organophosphate pesticide hydrolase, at 281,800 to 282,753
GFF607
GFF608 - Glucans biosynthesis glucosyltransferase H (EC 2.4.1.-), at 282,805 to 284,769
GFF608
Position (kb) 281
282
283 Strain fitness (log2 ratio) -1
0
1 at 280.970 kb on + strand, within GFF606 at 280.987 kb on + strand, within GFF606 at 280.987 kb on + strand, within GFF606 at 280.988 kb on - strand, within GFF606 at 280.988 kb on - strand, within GFF606 at 280.988 kb on - strand, within GFF606 at 281.141 kb on + strand, within GFF606 at 281.141 kb on + strand, within GFF606 at 281.142 kb on - strand, within GFF606 at 281.142 kb on - strand, within GFF606 at 281.762 kb on - strand at 281.905 kb on + strand, within GFF607 at 281.906 kb on - strand, within GFF607 at 281.906 kb on - strand, within GFF607 at 282.064 kb on + strand, within GFF607 at 282.065 kb on - strand, within GFF607 at 282.382 kb on + strand, within GFF607 at 282.382 kb on + strand, within GFF607 at 282.382 kb on + strand, within GFF607 at 282.383 kb on - strand, within GFF607 at 282.383 kb on - strand, within GFF607 at 282.383 kb on - strand, within GFF607 at 282.484 kb on + strand, within GFF607 at 282.485 kb on + strand, within GFF607 at 282.485 kb on - strand, within GFF607 at 282.485 kb on - strand, within GFF607 at 282.485 kb on - strand, within GFF607 at 282.625 kb on + strand, within GFF607 at 282.625 kb on + strand, within GFF607 at 282.626 kb on - strand, within GFF607 at 282.737 kb on - strand at 283.445 kb on + strand, within GFF608 at 283.446 kb on - strand, within GFF608 at 283.446 kb on - strand, within GFF608 at 283.446 kb on - strand, within GFF608 at 283.589 kb on + strand, within GFF608 at 283.589 kb on + strand, within GFF608 at 283.589 kb on + strand, within GFF608 at 283.590 kb on - strand, within GFF608 at 283.590 kb on - strand, within GFF608
Per-strain Table
Position Strand Gene LocusTag Fraction Ying_sugar7 rep C; time point 3 remove 280,970 + GFF606 0.58 +0.2 280,987 + GFF606 0.60 -1.0 280,987 + GFF606 0.60 +0.5 280,988 - GFF606 0.60 -0.1 280,988 - GFF606 0.60 -0.1 280,988 - GFF606 0.60 -0.7 281,141 + GFF606 0.77 -0.6 281,141 + GFF606 0.77 +0.1 281,142 - GFF606 0.77 -0.9 281,142 - GFF606 0.77 -0.3 281,762 - -0.5 281,905 + GFF607 0.11 +0.4 281,906 - GFF607 0.11 +0.4 281,906 - GFF607 0.11 +0.2 282,064 + GFF607 0.28 +0.6 282,065 - GFF607 0.28 +1.2 282,382 + GFF607 0.61 +1.6 282,382 + GFF607 0.61 -0.4 282,382 + GFF607 0.61 +0.3 282,383 - GFF607 0.61 +0.1 282,383 - GFF607 0.61 -0.3 282,383 - GFF607 0.61 +0.3 282,484 + GFF607 0.72 -0.4 282,485 + GFF607 0.72 +0.2 282,485 - GFF607 0.72 -1.0 282,485 - GFF607 0.72 +1.4 282,485 - GFF607 0.72 +0.3 282,625 + GFF607 0.86 -0.6 282,625 + GFF607 0.86 +0.0 282,626 - GFF607 0.87 +0.3 282,737 - -0.6 283,445 + GFF608 0.33 +1.0 283,446 - GFF608 0.33 -0.5 283,446 - GFF608 0.33 +0.3 283,446 - GFF608 0.33 -0.5 283,589 + GFF608 0.40 +0.1 283,589 + GFF608 0.40 +0.2 283,589 + GFF608 0.40 -0.4 283,590 - GFF608 0.40 +1.0 283,590 - GFF608 0.40 -0.1
Or see this region's nucleotide sequence