Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5415
Experiment: Ying_sugar7 rep C; time point 3
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Ying_sugar7 rep C; time point 3 |
---|---|---|---|---|---|
remove | |||||
2,416,040 | + | GFF5414 | 0.68 | -1.4 | |
2,416,336 | + | -2.5 | |||
2,416,337 | - | -1.0 | |||
2,416,337 | - | -2.7 | |||
2,416,442 | - | GFF5415 | 0.13 | -2.0 | |
2,416,631 | - | GFF5415 | 0.24 | -1.3 | |
2,416,681 | + | GFF5415 | 0.27 | -1.7 | |
2,416,681 | + | GFF5415 | 0.27 | -4.0 | |
2,416,682 | - | GFF5415 | 0.27 | -0.6 | |
2,417,005 | + | GFF5415 | 0.46 | -1.7 | |
2,417,006 | - | GFF5415 | 0.46 | -3.2 | |
2,417,536 | + | GFF5415 | 0.77 | -1.7 | |
2,417,925 | + | -0.8 | |||
2,417,925 | + | -1.8 |
Or see this region's nucleotide sequence