Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5010

Experiment: Ying_sugar7 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep C; time point 3
2,024,330	+		GFF5009	0.46	+0.5
2,024,330	+		GFF5009	0.46	-0.3
2,024,331	-		GFF5009	0.46	+0.2
2,024,331	-		GFF5009	0.46	-0.1
2,024,414	+		GFF5009	0.51	-0.3
2,024,708	+		GFF5009	0.69	+2.4
2,024,708	+		GFF5009	0.69	-1.0
2,025,192	-				-0.8
2,025,413	+		GFF5010	0.24	+1.3
2,025,560	+		GFF5010	0.42	+0.5
2,025,601	-		GFF5010	0.47	+0.1
2,026,193	-		GFF5011	0.12	+0.7
2,026,193	-		GFF5011	0.12	-0.0
2,026,193	-		GFF5011	0.12	-0.5
2,026,342	+		GFF5011	0.23	+0.7
2,026,574	-		GFF5011	0.39	-0.5
2,026,729	+		GFF5011	0.50	+0.2
2,026,730	-		GFF5011	0.50	-0.6
2,026,730	-		GFF5011	0.50	-0.0