Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4657

Experiment: Ying_sugar7 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep C; time point 3
1,608,210	+		GFF4656	0.69	-0.7
1,608,211	-		GFF4656	0.70	+0.1
1,608,211	-		GFF4656	0.70	-0.3
1,608,211	-		GFF4656	0.70	+2.1
1,608,211	-		GFF4656	0.70	-0.5
1,608,318	+		GFF4656	0.79	+0.3
1,608,540	+				-2.5
1,608,540	+				+0.3
1,608,540	+				+0.3
1,608,540	+				-0.9
1,608,540	+				+0.2
1,608,541	-				+1.7
1,608,541	-				+1.8
1,608,584	+				-0.1
1,608,584	+				-0.1
1,608,584	+				+0.5
1,608,584	+				-0.2
1,608,586	+				-0.1
1,608,586	+				+0.9
1,608,587	-				+0.0
1,608,587	-				+0.1
1,608,587	-				+0.3
1,608,610	-				-2.1
1,608,785	-		GFF4657	0.17	-0.4
1,608,929	-		GFF4657	0.31	+0.5
1,609,336	+		GFF4657	0.70	-1.1
1,609,337	-		GFF4657	0.70	+0.1
1,609,486	+		GFF4657	0.85	+0.1
1,609,486	+		GFF4657	0.85	-1.1
1,609,486	+		GFF4657	0.85	-0.1
1,609,486	+		GFF4657	0.85	+0.5
1,609,487	-		GFF4657	0.85	-0.3
1,609,534	+		GFF4657	0.89	-0.5
1,609,535	-		GFF4657	0.89	-0.2
1,609,739	+		GFF4658	0.11	+0.4
1,609,740	-		GFF4658	0.11	-1.1
1,609,740	-		GFF4658	0.11	-1.2
1,609,772	+		GFF4658	0.15	-0.7
1,609,797	-		GFF4658	0.17	-0.1
1,609,797	-		GFF4658	0.17	-0.8
1,609,832	+		GFF4658	0.22	+0.3
1,609,832	+		GFF4658	0.22	-1.1
1,609,832	+		GFF4658	0.22	-0.0
1,609,832	+		GFF4658	0.22	-0.4
1,609,833	-		GFF4658	0.22	-0.2
1,609,833	-		GFF4658	0.22	+0.1
1,609,833	-		GFF4658	0.22	-0.4
1,609,833	-		GFF4658	0.22	-1.1
1,609,833	-		GFF4658	0.22	+0.2
1,609,833	-		GFF4658	0.22	+0.6
1,609,833	-		GFF4658	0.22	-0.1
1,609,988	+		GFF4658	0.40	-0.5
1,609,988	+		GFF4658	0.40	-1.4
1,609,988	+		GFF4658	0.40	+0.1
1,609,988	+		GFF4658	0.40	-0.1
1,609,988	+		GFF4658	0.40	-1.4
1,609,989	-		GFF4658	0.40	+0.6
1,609,989	-		GFF4658	0.40	+0.0
1,609,989	-		GFF4658	0.40	+1.2
1,609,989	-		GFF4658	0.40	-1.9
1,610,222	+		GFF4658	0.67	+0.0
1,610,427	-				-1.1
1,610,427	-				-0.5
1,610,427	-				+0.9
1,610,427	-				+0.2