Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4627

Experiment: Ying_sugar7 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep C; time point 3
1,576,922	-		GFF4626	0.48	-0.1
1,576,922	-		GFF4626	0.48	-0.2
1,577,416	+		GFF4626	0.73	-0.3
1,577,417	-		GFF4626	0.74	-0.6
1,577,417	-		GFF4626	0.74	+0.4
1,577,462	-		GFF4626	0.76	+1.7
1,577,462	-		GFF4626	0.76	-0.7
1,577,659	+		GFF4626	0.86	+0.4
1,577,659	+		GFF4626	0.86	-0.9
1,577,659	+		GFF4626	0.86	+0.6
1,577,660	-		GFF4626	0.86	+0.6
1,577,660	-		GFF4626	0.86	+0.6
1,577,766	+				-0.4
1,577,768	-				-1.4
1,577,768	-				-1.7
1,577,845	+				-0.1
1,578,074	+		GFF4627	0.64	+0.2
1,578,105	-		GFF4627	0.75	+0.4
1,578,163	+				+0.1
1,578,163	+				-0.5
1,578,163	+				+0.1
1,578,164	-				+1.2
1,578,238	+				+0.9
1,578,238	+				+0.8
1,578,239	-				-1.3
1,578,273	-				-0.1
1,578,295	+				-0.5
1,578,296	-				-0.1
1,578,327	+				-0.0
1,578,327	+				-0.5
1,578,327	+				-0.4
1,578,328	-				+0.2
1,578,328	-				+0.1
1,578,333	-				+0.3
1,578,619	+		GFF4628	0.16	-0.2
1,578,885	+		GFF4628	0.28	+0.9
1,578,886	-		GFF4628	0.28	-0.4
1,578,894	+		GFF4628	0.29	-0.0
1,578,919	+		GFF4628	0.30	-0.4
1,578,920	-		GFF4628	0.30	+0.6
1,578,920	-		GFF4628	0.30	-2.0
1,578,929	+		GFF4628	0.30	-0.0
1,578,963	+		GFF4628	0.32	-0.2