Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4062

Experiment: Ying_sugar7 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep C; time point 3
979,293	+		GFF4060	0.84	-0.7
979,294	-		GFF4060	0.84	-0.0
979,294	-		GFF4060	0.84	-0.5
979,294	-		GFF4060	0.84	+0.1
979,416	+				-0.6
979,417	-				-2.0
979,425	+				-0.4
979,426	-				+1.0
979,564	+				-0.7
979,564	+				-0.2
979,564	+				-0.1
979,565	-				+1.3
979,565	-				+0.6
979,582	+				+1.5
979,816	+		GFF4061	0.67	-0.1
979,817	-		GFF4061	0.67	-0.0
979,823	-		GFF4061	0.68	-0.1
980,096	+		GFF4062	0.51	-1.8
980,210	+		GFF4062	0.88	-0.3