Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF3784

Experiment: Ying_sugar7 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep C; time point 3
682,273	+		GFF3783	0.73	+0.3
682,385	-		GFF3783	0.79	+0.5
682,681	+				-0.5
682,682	-				+0.7
683,070	+		GFF3784	0.20	+0.5
683,070	+		GFF3784	0.20	+0.0
683,071	-		GFF3784	0.20	+0.1
683,190	+		GFF3784	0.35	+0.3
683,191	-		GFF3784	0.36	+1.1
683,191	-		GFF3784	0.36	-0.7
683,734	+				-1.1
683,742	+				-0.1
683,797	-				+0.4
683,943	+				-0.4
684,008	+				-0.1
684,024	+				+0.6
684,155	+				+0.5
684,188	+		GFF3785	0.12	-0.6
684,188	+		GFF3785	0.12	+0.2
684,189	-		GFF3785	0.13	-0.2
684,189	-		GFF3785	0.13	+0.5
684,233	+		GFF3785	0.18	+0.3
684,480	-		GFF3785	0.46	+0.5
684,503	+		GFF3785	0.49	+0.4
684,504	-		GFF3785	0.49	-0.5
684,504	-		GFF3785	0.49	+0.1