Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF345

Experiment: Ying_sugar7 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep C; time point 3
6,338	+				-2.1
6,641	+		GFF345	0.16	-0.6
6,642	-		GFF345	0.16	-0.4
6,642	-		GFF345	0.16	-0.6
6,642	-		GFF345	0.16	-1.0
6,642	-		GFF345	0.16	-0.6
7,022	+		GFF345	0.46	-0.4
7,857	+				+0.0
7,858	-				+1.4
8,166	+		GFF346	0.20	-1.6
8,343	+		GFF346	0.30	-0.8
8,344	-		GFF346	0.30	-0.8
8,344	-		GFF346	0.30	-2.4
8,532	+		GFF346	0.40	-0.2
8,532	+		GFF346	0.40	-0.8
8,532	+		GFF346	0.40	-1.0
8,559	+		GFF346	0.41	-0.3
8,631	+		GFF346	0.45	+0.4
8,631	+		GFF346	0.45	+1.0
8,632	-		GFF346	0.45	+0.0
8,632	-		GFF346	0.45	-0.5
8,695	-		GFF346	0.49	-0.1