Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF2715

Experiment: Ying_sugar7 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep C; time point 3
305,647	+		GFF2714	0.37	+0.4
305,647	+		GFF2714	0.37	+0.5
305,989	+		GFF2714	0.65	-1.5
307,062	+		GFF2715	0.74	-1.1
307,062	+		GFF2715	0.74	-1.1
307,062	+		GFF2715	0.74	-1.1
307,063	-		GFF2715	0.74	-1.7
307,284	+				-2.2
307,284	+				-0.5
307,284	+				-1.0
307,285	-				+0.4
307,285	-				-0.3
307,285	-				-1.1
307,285	-				-0.6
307,285	-				-0.5
307,285	-				-2.2
307,285	-				-0.9
307,777	+				-1.2
307,777	+				-1.0
307,777	+				+0.2
307,777	+				+0.0
307,777	+				+0.7
307,778	-				+0.6
307,793	-				-1.1
307,855	+				-0.2
307,855	+				-0.6
307,855	+				+0.2
307,856	-				+0.1
307,856	-				+0.2
307,856	-				-1.1
307,856	-				-1.6
307,856	-				-0.1
307,856	-				-0.3
307,856	-				-0.0