Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF2569

Experiment: Ying_sugar7 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep C; time point 3
159,418	+				-3.8
159,418	+				-1.8
160,469	+				-0.1
160,469	+				-0.1
160,469	+				+0.2
160,469	+				+0.3
160,469	+				+0.4
160,469	+				+0.1
160,469	+				-0.1
160,469	+				+0.3
160,469	+				+0.1
160,469	+				+0.3
160,470	-				+0.4
160,470	-				-0.7
160,470	-				-0.5
160,470	-				-0.3
160,470	-				-0.1
160,470	-				-0.6
160,471	+				+0.9
160,472	-				+0.2
160,472	-				+0.8
160,494	-				+0.2
160,543	+				+0.4
160,543	+				-2.2
160,543	+				-1.8
160,544	-				+0.5
160,544	-				-2.6
160,544	-				+0.8
160,544	-				-3.4
160,544	-				+0.0
160,544	-				+0.5
161,123	+		GFF2570	0.24	+0.1
161,123	+		GFF2570	0.24	+0.2
161,123	+		GFF2570	0.24	+0.2
161,123	+		GFF2570	0.24	+0.9
161,124	-		GFF2570	0.24	+0.1
161,124	-		GFF2570	0.24	+0.2
161,124	-		GFF2570	0.24	+0.4
161,124	-		GFF2570	0.24	-0.4
161,124	-		GFF2570	0.24	-0.5