Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF2373

Experiment: Ying_sugar7 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep C; time point 3
12,169	-		GFF2372	0.18	-0.2
12,300	+		GFF2372	0.30	-0.6
12,300	+		GFF2372	0.30	-0.7
12,300	+		GFF2372	0.30	-0.2
12,300	+		GFF2372	0.30	+0.6
12,301	-		GFF2372	0.30	-0.6
12,301	-		GFF2372	0.30	+0.4
12,301	-		GFF2372	0.30	-0.1
12,451	-		GFF2372	0.45	+0.0
12,501	+		GFF2372	0.50	+0.1
12,502	-		GFF2372	0.50	+1.4
12,502	-		GFF2372	0.50	-0.2
12,659	-		GFF2372	0.65	+0.2
12,659	-		GFF2372	0.65	-0.3
12,659	-		GFF2372	0.65	-0.9
12,925	-				+1.8
13,000	-				-0.2
14,084	+		GFF2373	0.85	-0.1
14,881	-		GFF2374	0.22	+0.5
14,907	+		GFF2374	0.23	-0.2
14,907	+		GFF2374	0.23	+1.5
15,021	+		GFF2374	0.28	+0.3
15,199	+		GFF2374	0.37	-0.1
15,200	-		GFF2374	0.37	+1.4