Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF2331

Experiment: Ying_sugar7 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep C; time point 3
1,215,271	-		GFF2330	0.34	+1.0
1,215,418	-		GFF2330	0.44	-1.0
1,215,444	+		GFF2330	0.45	+1.4
1,215,444	+		GFF2330	0.45	+1.6
1,215,444	+		GFF2330	0.45	-0.4
1,215,445	-		GFF2330	0.45	+1.1
1,215,594	+		GFF2330	0.55	-0.3
1,215,780	-		GFF2330	0.68	-1.0
1,215,783	+		GFF2330	0.68	+1.1
1,215,783	+		GFF2330	0.68	-0.2
1,215,783	+		GFF2330	0.68	+0.4
1,215,784	-		GFF2330	0.68	+1.4
1,215,784	-		GFF2330	0.68	+0.5
1,216,386	+		GFF2331	0.12	+0.2
1,216,387	-		GFF2331	0.12	-0.6
1,216,387	-		GFF2331	0.12	-0.3
1,216,794	-		GFF2331	0.51	-0.2
1,216,794	-		GFF2331	0.51	+0.4
1,216,794	-		GFF2331	0.51	+0.8
1,216,949	+		GFF2331	0.66	-0.6
1,216,949	+		GFF2331	0.66	-0.5
1,216,949	+		GFF2331	0.66	-0.0
1,216,950	-		GFF2331	0.66	-0.1
1,217,536	+		GFF2332	0.33	+1.0
1,217,720	+		GFF2332	0.59	-1.7
1,217,734	+		GFF2332	0.61	+0.8
1,217,734	+		GFF2332	0.61	-1.0
1,217,735	-		GFF2332	0.61	+0.2
1,217,735	-		GFF2332	0.61	+0.6
1,217,735	-		GFF2332	0.61	+0.3
1,217,812	+		GFF2332	0.72	-0.6
1,217,813	-		GFF2332	0.72	-0.4
1,217,813	-		GFF2332	0.72	-0.3
1,218,027	+				-0.5
1,218,027	+				+1.0
1,218,090	+		GFF2333	0.11	+0.8
1,218,090	+		GFF2333	0.11	+0.5
1,218,091	-		GFF2333	0.11	+0.1
1,218,219	+		GFF2333	0.30	-0.6
1,218,220	-		GFF2333	0.30	+0.1
1,218,220	-		GFF2333	0.30	-0.1
1,218,220	-		GFF2333	0.30	-0.0
1,218,220	-		GFF2333	0.30	-1.6
1,218,220	-		GFF2333	0.30	+0.1