Experiment: LZ4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_02078 and OHPLBJKB_02079 are separated by 80 nucleotides OHPLBJKB_02079 and OHPLBJKB_02080 are separated by 0 nucleotides
OHPLBJKB_02078: OHPLBJKB_02078 - Oxidoreductase YdhF, at 2,155,059 to 2,155,955
_02078
OHPLBJKB_02079: OHPLBJKB_02079 - Superoxide dismutase [Cu-Zn], at 2,156,036 to 2,156,557
_02079
OHPLBJKB_02080: OHPLBJKB_02080 - p-hydroxybenzoic acid efflux pump subunit AaeB, at 2,156,558 to 2,158,570
_02080
Position (kb)
2156
2157 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2155.037 kb on + strand at 2155.070 kb on + strand at 2155.070 kb on + strand at 2155.071 kb on - strand at 2155.073 kb on + strand at 2155.074 kb on - strand at 2155.076 kb on + strand at 2155.142 kb on + strand at 2155.142 kb on + strand at 2155.218 kb on - strand, within OHPLBJKB_02078 at 2155.218 kb on - strand, within OHPLBJKB_02078 at 2155.218 kb on - strand, within OHPLBJKB_02078 at 2155.222 kb on - strand, within OHPLBJKB_02078 at 2155.222 kb on - strand, within OHPLBJKB_02078 at 2155.304 kb on + strand, within OHPLBJKB_02078 at 2155.353 kb on + strand, within OHPLBJKB_02078 at 2155.353 kb on + strand, within OHPLBJKB_02078 at 2155.354 kb on - strand, within OHPLBJKB_02078 at 2155.354 kb on - strand, within OHPLBJKB_02078 at 2155.354 kb on - strand, within OHPLBJKB_02078 at 2155.354 kb on - strand, within OHPLBJKB_02078 at 2155.354 kb on - strand, within OHPLBJKB_02078 at 2155.354 kb on - strand, within OHPLBJKB_02078 at 2155.380 kb on - strand, within OHPLBJKB_02078 at 2155.380 kb on - strand, within OHPLBJKB_02078 at 2155.403 kb on + strand, within OHPLBJKB_02078 at 2155.403 kb on + strand, within OHPLBJKB_02078 at 2155.654 kb on + strand, within OHPLBJKB_02078 at 2155.655 kb on - strand, within OHPLBJKB_02078 at 2155.655 kb on - strand, within OHPLBJKB_02078 at 2155.723 kb on - strand, within OHPLBJKB_02078 at 2155.808 kb on - strand, within OHPLBJKB_02078 at 2155.810 kb on + strand, within OHPLBJKB_02078 at 2155.811 kb on - strand, within OHPLBJKB_02078 at 2155.811 kb on - strand, within OHPLBJKB_02078 at 2155.817 kb on - strand, within OHPLBJKB_02078 at 2155.817 kb on - strand, within OHPLBJKB_02078 at 2155.817 kb on - strand, within OHPLBJKB_02078 at 2155.949 kb on - strand at 2155.953 kb on + strand at 2156.006 kb on - strand at 2156.006 kb on - strand at 2156.006 kb on - strand at 2156.035 kb on + strand at 2156.048 kb on - strand at 2156.048 kb on - strand at 2156.237 kb on - strand, within OHPLBJKB_02079 at 2156.237 kb on - strand, within OHPLBJKB_02079 at 2156.364 kb on + strand, within OHPLBJKB_02079 at 2156.491 kb on + strand, within OHPLBJKB_02079 at 2156.491 kb on + strand, within OHPLBJKB_02079 at 2156.492 kb on - strand, within OHPLBJKB_02079 at 2156.492 kb on - strand, within OHPLBJKB_02079 at 2156.535 kb on - strand at 2156.548 kb on - strand at 2156.548 kb on - strand at 2156.548 kb on - strand at 2156.551 kb on + strand at 2156.552 kb on - strand at 2156.555 kb on + strand at 2156.556 kb on - strand at 2156.559 kb on + strand at 2156.559 kb on + strand at 2156.560 kb on - strand at 2156.560 kb on - strand at 2156.613 kb on + strand at 2156.613 kb on + strand at 2156.764 kb on + strand, within OHPLBJKB_02080 at 2156.764 kb on + strand, within OHPLBJKB_02080 at 2156.764 kb on + strand, within OHPLBJKB_02080 at 2156.764 kb on + strand, within OHPLBJKB_02080 at 2156.765 kb on - strand, within OHPLBJKB_02080 at 2156.765 kb on - strand, within OHPLBJKB_02080 at 2156.770 kb on + strand, within OHPLBJKB_02080 at 2156.770 kb on + strand, within OHPLBJKB_02080 at 2156.852 kb on + strand, within OHPLBJKB_02080 at 2156.923 kb on - strand, within OHPLBJKB_02080 at 2156.969 kb on + strand, within OHPLBJKB_02080 at 2156.969 kb on + strand, within OHPLBJKB_02080 at 2156.969 kb on + strand, within OHPLBJKB_02080 at 2156.970 kb on - strand, within OHPLBJKB_02080 at 2157.317 kb on + strand, within OHPLBJKB_02080 at 2157.352 kb on + strand, within OHPLBJKB_02080 at 2157.389 kb on - strand, within OHPLBJKB_02080 at 2157.439 kb on + strand, within OHPLBJKB_02080 at 2157.440 kb on - strand, within OHPLBJKB_02080 at 2157.475 kb on + strand, within OHPLBJKB_02080 at 2157.476 kb on - strand, within OHPLBJKB_02080 at 2157.557 kb on + strand, within OHPLBJKB_02080 at 2157.557 kb on + strand, within OHPLBJKB_02080
Per-strain Table
Position Strand Gene LocusTag Fraction LZ4 remove 2,155,037 + +0.6 2,155,070 + -0.5 2,155,070 + +1.6 2,155,071 - +0.4 2,155,073 + -0.3 2,155,074 - +0.5 2,155,076 + +0.8 2,155,142 + +0.1 2,155,142 + +0.5 2,155,218 - OHPLBJKB_02078 0.18 -1.2 2,155,218 - OHPLBJKB_02078 0.18 +2.1 2,155,218 - OHPLBJKB_02078 0.18 +0.5 2,155,222 - OHPLBJKB_02078 0.18 -0.3 2,155,222 - OHPLBJKB_02078 0.18 +0.6 2,155,304 + OHPLBJKB_02078 0.27 +0.4 2,155,353 + OHPLBJKB_02078 0.33 +0.7 2,155,353 + OHPLBJKB_02078 0.33 +0.7 2,155,354 - OHPLBJKB_02078 0.33 -0.5 2,155,354 - OHPLBJKB_02078 0.33 +2.6 2,155,354 - OHPLBJKB_02078 0.33 -0.5 2,155,354 - OHPLBJKB_02078 0.33 -0.5 2,155,354 - OHPLBJKB_02078 0.33 -2.6 2,155,354 - OHPLBJKB_02078 0.33 +0.6 2,155,380 - OHPLBJKB_02078 0.36 +1.2 2,155,380 - OHPLBJKB_02078 0.36 -0.2 2,155,403 + OHPLBJKB_02078 0.38 +1.4 2,155,403 + OHPLBJKB_02078 0.38 +0.2 2,155,654 + OHPLBJKB_02078 0.66 +0.1 2,155,655 - OHPLBJKB_02078 0.66 -0.3 2,155,655 - OHPLBJKB_02078 0.66 +0.5 2,155,723 - OHPLBJKB_02078 0.74 +0.6 2,155,808 - OHPLBJKB_02078 0.84 +1.5 2,155,810 + OHPLBJKB_02078 0.84 +0.4 2,155,811 - OHPLBJKB_02078 0.84 -1.5 2,155,811 - OHPLBJKB_02078 0.84 +0.2 2,155,817 - OHPLBJKB_02078 0.85 +1.6 2,155,817 - OHPLBJKB_02078 0.85 +1.1 2,155,817 - OHPLBJKB_02078 0.85 +0.7 2,155,949 - -1.5 2,155,953 + -0.1 2,156,006 - +0.6 2,156,006 - +0.1 2,156,006 - -0.6 2,156,035 + -1.3 2,156,048 - -0.5 2,156,048 - -0.1 2,156,237 - OHPLBJKB_02079 0.39 +1.4 2,156,237 - OHPLBJKB_02079 0.39 -0.8 2,156,364 + OHPLBJKB_02079 0.63 -1.3 2,156,491 + OHPLBJKB_02079 0.87 +0.4 2,156,491 + OHPLBJKB_02079 0.87 +0.6 2,156,492 - OHPLBJKB_02079 0.87 -0.1 2,156,492 - OHPLBJKB_02079 0.87 +1.6 2,156,535 - +0.4 2,156,548 - +0.7 2,156,548 - -0.9 2,156,548 - -0.2 2,156,551 + +0.2 2,156,552 - +0.5 2,156,555 + +0.3 2,156,556 - -0.5 2,156,559 + +0.6 2,156,559 + -1.5 2,156,560 - +0.8 2,156,560 - +2.4 2,156,613 + -0.6 2,156,613 + +0.2 2,156,764 + OHPLBJKB_02080 0.10 -0.0 2,156,764 + OHPLBJKB_02080 0.10 +0.4 2,156,764 + OHPLBJKB_02080 0.10 -0.4 2,156,764 + OHPLBJKB_02080 0.10 +1.1 2,156,765 - OHPLBJKB_02080 0.10 -0.1 2,156,765 - OHPLBJKB_02080 0.10 -0.5 2,156,770 + OHPLBJKB_02080 0.11 -0.3 2,156,770 + OHPLBJKB_02080 0.11 +0.1 2,156,852 + OHPLBJKB_02080 0.15 -2.1 2,156,923 - OHPLBJKB_02080 0.18 -0.3 2,156,969 + OHPLBJKB_02080 0.20 +0.5 2,156,969 + OHPLBJKB_02080 0.20 +0.2 2,156,969 + OHPLBJKB_02080 0.20 -0.7 2,156,970 - OHPLBJKB_02080 0.20 -0.5 2,157,317 + OHPLBJKB_02080 0.38 -1.2 2,157,352 + OHPLBJKB_02080 0.39 -0.1 2,157,389 - OHPLBJKB_02080 0.41 +0.5 2,157,439 + OHPLBJKB_02080 0.44 -0.5 2,157,440 - OHPLBJKB_02080 0.44 -0.1 2,157,475 + OHPLBJKB_02080 0.46 +0.5 2,157,476 - OHPLBJKB_02080 0.46 +0.1 2,157,557 + OHPLBJKB_02080 0.50 +0.5 2,157,557 + OHPLBJKB_02080 0.50 +0.7
Or see this region's nucleotide sequence