Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS25305

Experiment: Experiment:TE2, Melon 1 Petiole 2 (TE2-S-M1-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Melon 1 Petiole 2 (TE2-S-M1-P2)
4,812,458	-				-1.6
4,812,580	-				-0.1
4,814,275	+	yidD	LU632_RS25310	0.41	+0.8
4,814,302	+	yidD	LU632_RS25310	0.51	-1.3
4,814,302	+	yidD	LU632_RS25310	0.51	-1.5
4,814,302	+	yidD	LU632_RS25310	0.51	+0.6
4,814,303	-	yidD	LU632_RS25310	0.52	-1.3
4,814,304	+	yidD	LU632_RS25310	0.52	-0.8
4,814,304	+	yidD	LU632_RS25310	0.52	-1.7
4,814,304	+	yidD	LU632_RS25310	0.52	-0.8
4,814,305	-	yidD	LU632_RS25310	0.53	-0.1
4,814,373	-	yidD	LU632_RS25310	0.79	-1.8
4,815,038	+				+1.5
4,815,064	+				-0.8
4,815,065	-				+0.2
4,815,066	+				-0.0
4,815,067	-				+0.1
4,815,128	+				-0.9
4,815,130	+				+1.5
4,815,137	+				+5.1