Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS17825

Experiment: Experiment:TE2, Melon 1 Petiole 2 (TE2-S-M1-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Melon 1 Petiole 2 (TE2-S-M1-P2)
3,356,831	-				+0.1
3,356,850	-				-0.4
3,356,850	-				+0.3
3,356,870	+				+0.2
3,356,877	-				+0.5
3,356,878	-				+0.5
3,356,928	-				+0.4
3,357,039	-	ndk	LU632_RS17820	0.26	-2.1
3,357,039	-	ndk	LU632_RS17820	0.26	-3.0
3,357,207	-	ndk	LU632_RS17820	0.65	-2.7
3,357,328	+				-4.0
3,357,342	+				-4.7
3,357,352	-				-2.6
3,357,379	+				-1.9
3,357,379	+				-1.8
3,357,380	-				+2.7
3,357,380	-				+2.1
3,357,557	-				-1.0
3,357,573	+				+0.5
3,357,574	-				+1.1
3,357,713	-				-0.0
3,359,278	+				+1.1
3,359,279	-				+0.1
3,359,303	-				+1.1
3,359,717	-		LU632_RS17830	0.52	-0.1
3,359,841	+		LU632_RS17830	0.69	+3.1
3,359,913	+		LU632_RS17830	0.79	-4.1