Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS15990

Experiment: Experiment:TE2, Melon 1 Petiole 2 (TE2-S-M1-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Melon 1 Petiole 2 (TE2-S-M1-P2)
3,019,586	-				-1.5
3,019,588	+				-0.9
3,019,595	+				-0.9
3,019,596	-				-2.4
3,019,649	+				+1.1
3,019,684	+		LU632_RS15985	0.13	-0.5
3,019,698	-		LU632_RS15985	0.15	-0.8
3,019,750	-		LU632_RS15985	0.21	+1.1
3,019,828	+		LU632_RS15985	0.29	+0.3
3,019,831	-		LU632_RS15985	0.30	+0.3
3,019,911	+		LU632_RS15985	0.39	+0.3
3,020,011	+		LU632_RS15985	0.50	+0.1
3,020,012	-		LU632_RS15985	0.50	+1.9
3,020,017	+		LU632_RS15985	0.50	-2.1
3,020,078	-		LU632_RS15985	0.57	-0.6
3,020,089	+		LU632_RS15985	0.58	+3.9
3,020,174	-		LU632_RS15985	0.68	-0.5
3,020,177	+		LU632_RS15985	0.68	+0.7
3,020,178	-		LU632_RS15985	0.68	+0.1
3,020,206	+		LU632_RS15985	0.71	-0.5
3,020,207	-		LU632_RS15985	0.71	+0.9
3,020,254	-		LU632_RS15985	0.76	+0.9
3,020,279	+		LU632_RS15985	0.79	-1.5
3,020,280	-		LU632_RS15985	0.79	-2.0
3,020,330	-		LU632_RS15985	0.85	-1.0
3,020,521	+				+1.2
3,020,525	+				+1.1
3,020,526	-				+3.1
3,020,603	-		LU632_RS15990	0.12	+0.9
3,020,672	+		LU632_RS15990	0.30	-1.3
3,020,672	+		LU632_RS15990	0.30	+0.4
3,020,672	+		LU632_RS15990	0.30	-0.8
3,020,673	-		LU632_RS15990	0.30	-0.5
3,020,676	+		LU632_RS15990	0.31	-0.1
3,020,676	+		LU632_RS15990	0.31	-0.1
3,020,677	-		LU632_RS15990	0.31	-0.9
3,020,677	-		LU632_RS15990	0.31	+0.6
3,021,025	+				+1.6
3,021,026	-				+0.2
3,021,041	-				-0.2
3,021,099	+				-1.8
3,021,100	-				-2.5
3,021,193	+				+0.2
3,021,194	-				+0.2
3,021,198	+				+0.3
3,021,199	-				-1.1
3,021,364	+				-0.9
3,021,364	+				+0.5
3,021,364	+				-0.5
3,021,364	+				-0.1
3,021,364	+				-0.7
3,021,364	+				+0.0
3,021,364	+				-0.7
3,021,365	-				+0.6
3,021,365	-				-0.3
3,021,365	-				-2.4
3,021,365	-				-0.1
3,021,365	-				+0.1
3,021,452	-				-0.5
3,021,568	+		LU632_RS15995	0.11	-0.4
3,021,568	+		LU632_RS15995	0.11	+1.1
3,021,569	-		LU632_RS15995	0.11	+2.9
3,021,569	-		LU632_RS15995	0.11	+1.7
3,021,570	+		LU632_RS15995	0.11	+0.8
3,021,571	-		LU632_RS15995	0.11	-1.2
3,021,620	+		LU632_RS15995	0.14	+0.8
3,021,620	+		LU632_RS15995	0.14	+0.9
3,021,646	+		LU632_RS15995	0.15	-1.2
3,021,647	-		LU632_RS15995	0.15	+0.3
3,021,682	+		LU632_RS15995	0.17	-1.9
3,021,737	-		LU632_RS15995	0.20	-0.5
3,021,737	-		LU632_RS15995	0.20	+2.6
3,021,848	+		LU632_RS15995	0.26	-0.8
3,021,849	-		LU632_RS15995	0.26	+1.1
3,021,875	-		LU632_RS15995	0.27	+0.1
3,021,877	+		LU632_RS15995	0.27	+0.1
3,021,884	+		LU632_RS15995	0.28	-0.1
3,021,885	-		LU632_RS15995	0.28	-0.0
3,021,885	-		LU632_RS15995	0.28	-0.6
3,021,885	-		LU632_RS15995	0.28	-1.2
3,021,885	-		LU632_RS15995	0.28	-2.9