Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS13910
Experiment: Experiment:TE2, Melon 1 Petiole 2 (TE2-S-M1-P2)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Experiment:TE2, Melon 1 Petiole 2 (TE2-S-M1-P2) |
---|---|---|---|---|---|
remove | |||||
2,665,402 | + | -1.8 | |||
2,665,402 | + | -0.6 | |||
2,665,403 | - | -1.3 | |||
2,665,445 | + | +0.4 | |||
2,665,445 | + | +2.1 | |||
2,665,466 | + | -0.9 | |||
2,665,467 | - | -0.2 | |||
2,665,471 | - | -1.0 | |||
2,665,619 | + | +1.0 | |||
2,665,620 | - | +0.6 | |||
2,665,705 | + | +0.7 | |||
2,665,755 | + | +1.0 | |||
2,665,813 | + | -1.4 | |||
2,665,826 | + | +1.0 | |||
2,665,871 | + | -2.2 | |||
2,666,052 | + | -3.2 | |||
2,666,053 | - | +1.9 | |||
2,666,053 | - | +0.4 | |||
2,666,074 | + | +0.5 | |||
2,666,075 | - | +1.2 | |||
2,666,202 | - | -2.1 | |||
2,666,204 | + | +0.3 | |||
2,666,236 | + | -0.2 | |||
2,666,236 | + | -0.2 | |||
2,666,240 | + | -1.8 | |||
2,666,258 | - | -0.8 | |||
2,666,271 | - | +0.0 | |||
2,666,317 | + | -1.4 | |||
2,666,317 | + | +1.2 | |||
2,666,348 | - | -0.0 | |||
2,667,530 | + | -0.6 | |||
2,667,558 | + | +2.8 | |||
2,667,563 | + | +0.4 | |||
2,667,563 | + | -0.6 | |||
2,667,564 | - | -0.1 | |||
2,667,564 | - | -0.9 | |||
2,667,564 | - | +0.6 | |||
2,667,571 | - | +0.3 | |||
2,667,591 | + | -0.1 | |||
2,668,400 | + | +0.8 |
Or see this region's nucleotide sequence