Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS13285

Experiment: Experiment:TE2, Melon 1 Petiole 2 (TE2-S-M1-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Melon 1 Petiole 2 (TE2-S-M1-P2)
2,535,108	+				-1.7
2,535,108	+				+0.9
2,535,158	+				-0.3
2,535,171	+				-0.3
2,535,188	+				-0.9
2,535,249	-		LU632_RS13270	0.15	+4.2
2,535,349	+		LU632_RS13270	0.49	-0.7
2,535,350	-		LU632_RS13270	0.49	+1.3
2,535,352	+		LU632_RS13270	0.50	-0.5
2,535,394	+		LU632_RS13270	0.64	-1.1
2,535,395	-		LU632_RS13270	0.65	-0.2
2,535,395	-		LU632_RS13270	0.65	+0.0
2,535,395	-		LU632_RS13270	0.65	+1.5
2,535,395	-		LU632_RS13270	0.65	-0.4
2,535,395	-		LU632_RS13270	0.65	-0.5
2,535,395	-		LU632_RS13270	0.65	+2.5
2,535,413	-		LU632_RS13270	0.71	-1.8
2,535,426	+		LU632_RS13270	0.75	+0.3
2,535,426	+		LU632_RS13270	0.75	+0.7
2,535,427	-		LU632_RS13270	0.75	-0.1
2,535,453	+		LU632_RS13270	0.84	-1.9
2,535,459	-		LU632_RS13270	0.86	+4.4
2,535,484	+				-1.1
2,535,646	-		LU632_RS13275	0.45	-0.8
2,535,646	-		LU632_RS13275	0.45	+0.3
2,535,646	-		LU632_RS13275	0.45	+0.6
2,535,703	+		LU632_RS13275	0.61	+1.0
2,535,704	-		LU632_RS13275	0.61	+0.4
2,535,728	+		LU632_RS13275	0.68	-1.2
2,535,795	+		LU632_RS13275	0.88	-2.4
2,535,796	-		LU632_RS13275	0.88	-0.7
2,535,814	-				+0.1
2,535,814	-				-2.8
2,535,870	+				-1.4
2,535,871	-				-1.1
2,535,880	+				-2.8
2,535,913	+		LU632_RS13280	0.10	-0.3
2,536,078	-		LU632_RS13285	0.54	+1.6
2,536,126	+		LU632_RS13285	0.89	-0.4
2,536,305	-				-0.2
2,536,310	+				-1.1
2,536,319	+				-0.8
2,536,324	-				+1.1
2,536,408	-				-0.7
2,536,589	+		LU632_RS13290	0.58	+1.9
2,536,740	+				+0.6
2,536,767	+				+0.7
2,536,767	+				+0.4
2,536,768	-				-0.2
2,536,874	+				+0.2
2,536,874	+				+0.9
2,536,992	-	copD	LU632_RS13295	0.22	-0.4
2,536,993	+	copD	LU632_RS13295	0.22	-0.5
2,537,029	-	copD	LU632_RS13295	0.26	-2.3
2,537,076	-	copD	LU632_RS13295	0.32	-0.6
2,537,109	+	copD	LU632_RS13295	0.36	-0.2