Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS12310

Experiment: Experiment:TE2, Melon 1 Petiole 2 (TE2-S-M1-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Melon 1 Petiole 2 (TE2-S-M1-P2)
2,338,472	-		LU632_RS12305	0.33	+1.2
2,338,473	+		LU632_RS12305	0.33	-2.3
2,338,521	-		LU632_RS12305	0.37	+0.4
2,338,721	+		LU632_RS12305	0.53	+1.6
2,338,765	+		LU632_RS12305	0.57	+0.3
2,338,765	+		LU632_RS12305	0.57	+2.2
2,338,765	+		LU632_RS12305	0.57	-1.7
2,338,766	-		LU632_RS12305	0.57	+1.8
2,338,766	-		LU632_RS12305	0.57	-0.1
2,338,767	+		LU632_RS12305	0.57	+3.3
2,338,767	+		LU632_RS12305	0.57	+1.6
2,338,768	-		LU632_RS12305	0.57	-0.7
2,338,768	-		LU632_RS12305	0.57	+0.2
2,338,768	-		LU632_RS12305	0.57	+0.7
2,338,768	-		LU632_RS12305	0.57	+0.8
2,338,905	+		LU632_RS12305	0.68	+0.1
2,338,906	-		LU632_RS12305	0.68	+1.4
2,339,004	+		LU632_RS12305	0.77	+2.0
2,339,207	+				+2.9
2,339,303	+				+2.4
2,339,369	+				+1.9
2,339,370	-				-1.4
2,339,400	-				-1.1
2,339,400	-				+1.9
2,339,400	-				-0.3
2,339,401	+				-0.6
2,339,401	+				-0.1
2,339,402	-				+3.5
2,339,452	-		LU632_RS12310	0.20	-0.3
2,339,546	+		LU632_RS12310	0.76	+0.6
2,339,708	+				-1.4
2,339,764	+				-0.7
2,339,805	+		LU632_RS12315	0.13	+0.4
2,339,949	-		LU632_RS12315	0.26	-0.3
2,340,098	+		LU632_RS12315	0.40	+2.9
2,340,098	+		LU632_RS12315	0.40	-1.1
2,340,098	+		LU632_RS12315	0.40	-1.7
2,340,102	+		LU632_RS12315	0.40	+0.9
2,340,103	-		LU632_RS12315	0.40	+0.2
2,340,103	-		LU632_RS12315	0.40	-0.1
2,340,103	-		LU632_RS12315	0.40	+0.5
2,340,103	-		LU632_RS12315	0.40	-2.6
2,340,103	-		LU632_RS12315	0.40	+2.0
2,340,103	-		LU632_RS12315	0.40	-1.1
2,340,167	-		LU632_RS12315	0.46	-2.3
2,340,167	-		LU632_RS12315	0.46	-1.2
2,340,232	+		LU632_RS12315	0.52	-0.7
2,340,320	-		LU632_RS12315	0.59	-1.9
2,340,320	-		LU632_RS12315	0.59	-0.2
2,340,320	-		LU632_RS12315	0.59	-0.4
2,340,320	-		LU632_RS12315	0.59	-0.1
2,340,381	+		LU632_RS12315	0.65	+0.1
2,340,396	-		LU632_RS12315	0.66	-0.4
2,340,411	-		LU632_RS12315	0.68	-0.9
2,340,499	-		LU632_RS12315	0.76	-0.3
2,340,499	-		LU632_RS12315	0.76	-1.9
2,340,514	+		LU632_RS12315	0.77	-1.2